Just posting this to help out someone that may run into it. The quests "Cabal For One" and "Crucible" are swapped in the completion log. I ran Cabal twice just to make sure I had it completed and it never did. I paid for a bypass and reset the whole chain. After completing cabal (but not crucible) the saga giver told me I still had to run Cabal, but Crucible was done.
Looks to me like they are swapped. Bug reported too, but putting it here to help out anyone wondering why it wasn't counting completions.